{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {
    "scrolled": false
   },
   "outputs": [],
   "source": [
    "from engine import run\n",
    "import matplotlib.pyplot as plt\n",
    "import numpy as np\n",
    "\n",
    "%matplotlib inline"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [
    {
     "ename": "TypeError",
     "evalue": "cannot convert dictionary update sequence element #0 to a sequence",
     "output_type": "error",
     "traceback": [
      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
      "\u001b[0;31mTypeError\u001b[0m                                 Traceback (most recent call last)",
      "\u001b[0;32m<ipython-input-2-1c142ef7e71f>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[0;32m----> 1\u001b[0;31m \u001b[0md\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mrun\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mmain\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m",
      "\u001b[0;32m~/Documents/GitHub/DiffyQ-SimCAD/engine/run.py\u001b[0m in \u001b[0;36mmain\u001b[0;34m()\u001b[0m\n\u001b[1;32m     17\u001b[0m     \u001b[0;31m#r = range(5)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     18\u001b[0m     \u001b[0;31m# Dimensions: N x r x mechs\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 19\u001b[0;31m     \u001b[0ms\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0msimulation\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstates_list\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mconfigs\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0menv_processes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mr\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mN\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     20\u001b[0m     \u001b[0mresult\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpd\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mDataFrame\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mflatten\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0ms\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     21\u001b[0m     \u001b[0mprint\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m'Test'\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/Documents/GitHub/DiffyQ-SimCAD/engine/mechanismExecutor.py\u001b[0m in \u001b[0;36msimulation\u001b[0;34m(states_list, configs, env_processes, time_seq, runs)\u001b[0m\n\u001b[1;32m     72\u001b[0m     \u001b[0;32mfor\u001b[0m \u001b[0mrun\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mrange\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mruns\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     73\u001b[0m         \u001b[0;32mif\u001b[0m \u001b[0mrun\u001b[0m \u001b[0;34m==\u001b[0m \u001b[0;36m0\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 74\u001b[0;31m             \u001b[0mhead\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m*\u001b[0m\u001b[0mtail\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpipeline\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mstates_list\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mconfigs\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0menv_processes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtime_seq\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     75\u001b[0m             \u001b[0mhead\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'mech_step'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mhead\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'time_step'\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;36m0\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;36m0\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     76\u001b[0m             \u001b[0msimulation_list\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0mhead\u001b[0m\u001b[0;34m]\u001b[0m \u001b[0;34m+\u001b[0m \u001b[0mtail\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/Documents/GitHub/DiffyQ-SimCAD/engine/mechanismExecutor.py\u001b[0m in \u001b[0;36mpipeline\u001b[0;34m(states_list, configs, env_processes, time_seq)\u001b[0m\n\u001b[1;32m     61\u001b[0m     \u001b[0msimulation_list\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0;34m[\u001b[0m\u001b[0mstates_list\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     62\u001b[0m     \u001b[0;32mfor\u001b[0m \u001b[0mtime_step\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mtime_seq\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 63\u001b[0;31m         \u001b[0mpipeline_run\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mblock_gen\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0msimulation_list\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m-\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mconfigs\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0menv_processes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mtime_step\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     64\u001b[0m         \u001b[0mhead\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0;34m*\u001b[0m\u001b[0mpipeline_run\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mpipeline_run\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     65\u001b[0m         \u001b[0msimulation_list\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mappend\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mpipeline_run\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/Documents/GitHub/DiffyQ-SimCAD/engine/mechanismExecutor.py\u001b[0m in \u001b[0;36mblock_gen\u001b[0;34m(states_list, configs, env_processes, t_step)\u001b[0m\n\u001b[1;32m     49\u001b[0m     \u001b[0;32mfor\u001b[0m \u001b[0mconfig\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mconfigs\u001b[0m\u001b[0;34m:\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     50\u001b[0m         \u001b[0ms_conf\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mb_conf\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mconfig\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;36m0\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mconfig\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;36m1\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 51\u001b[0;31m         \u001b[0mstates_list\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mmech_step\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mm_step\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mstates_list\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0ms_conf\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mb_conf\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0menv_processes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mt_step\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     52\u001b[0m         \u001b[0mm_step\u001b[0m \u001b[0;34m+=\u001b[0m \u001b[0;36m1\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     53\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;32m~/Documents/GitHub/DiffyQ-SimCAD/engine/mechanismExecutor.py\u001b[0m in \u001b[0;36mmech_step\u001b[0;34m(m_step, sL, state_funcs, behavior_funcs, env_processes, t_step)\u001b[0m\n\u001b[1;32m     27\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     28\u001b[0m     \u001b[0;31m# New\u001b[0m\u001b[0;34m\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m---> 29\u001b[0;31m     \u001b[0mlast_mut_obj\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdict\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m[\u001b[0m \u001b[0mf\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mm_step\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0msL\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlast_mut_obj\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0m_input\u001b[0m\u001b[0;34m)\u001b[0m \u001b[0;32mfor\u001b[0m \u001b[0mf\u001b[0m \u001b[0;32min\u001b[0m \u001b[0mstate_funcs\u001b[0m \u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m     30\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m     31\u001b[0m     \u001b[0mapply_env_proc\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0menv_processes\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlast_mut_obj\u001b[0m\u001b[0;34m,\u001b[0m \u001b[0mlast_mut_obj\u001b[0m\u001b[0;34m[\u001b[0m\u001b[0;34m'timestamp'\u001b[0m\u001b[0;34m]\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
      "\u001b[0;31mTypeError\u001b[0m: cannot convert dictionary update sequence element #0 to a sequence"
     ]
    }
   ],
   "source": [
    "d=run.main()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "names = d.keys()[:4]\n",
    "for n in names:\n",
    "    d[n]=d[n].apply(float)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.plot(x=['time_step', 'mech_step'], figsize=(15,10))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d[d.time_step<10].plot(x=['time_step', 'mech_step'], figsize=(15,10))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d[\"invar\"]=(d.Pool/d.Supply)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.plot(x=['time_step', 'mech_step'], y = \"invar\", figsize=(15,10))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.Belief"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.tail()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.plot(x=['time_step', 'mech_step'], figsize=(15,10))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d[d.time_step<100].plot(x=['time_step', 'mech_step'], figsize=(15,10))"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.Pool.diff().apply(np.sign).hist()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": [
    "d['scale']= d.Supply.apply(np.log10)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.invar"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "d.head()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {
    "collapsed": true
   },
   "outputs": [],
   "source": []
  }
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